Why ~/.bash_profile is not getting sourced when opening a terminal?

~/.bash_profile is only sourced by bash when started in login mode. That is typically when you log in at the console (Ctrl+Alt+F1..F6), connect via ssh, or use sudo -i or su - to run commands as another user.

When you log in graphically, ~/.profile will be specifically sourced by the script that launches gnome-session (or whichever desktop environment you're using). So ~/.bash_profile is not sourced at all when you log in graphically.

When you open a terminal, the terminal starts bash in (non-login) interactive mode, which means it will source ~/.bashrc.

The right place for you to put these environment variables is in ~/.profile, and the effect should be apparent next time you log in.

Sourcing ~/.bash_profile from ~/.bashrc is the wrong solution. It's supposed to be the other way around; ~/.bash_profile should source ~/.bashrc.

See DotFiles for a more thorough explanation, including some history of why it is like it is.

(On a side note, when installing openjdk via apt, symlinks should be set up by the package, so that you don't really need to set JAVA_HOME or change PATH)

You can check if your Bash shell is started as a login-shell by running:

shopt login_shell

If the reply is off you are not running a login shell.

Read the Bash manual's invocation section on how Bash reads (or does not read) different configuration files.

Excerpt from man bash:

When bash is invoked as an interactive login shell, or as a non-interactive shell with the --login option, it first reads and executes commands from the file /etc/profile, if that file exists. After reading that file, it looks for ~/.bash_profile, ~/.bash_login, and ~/.profile, in that order, and reads and executes commands from the first one that exists and is readable.

su on the other hand also does not start a login shell by default, you have to tell it to do so by using the --login option.

I think it is worth mentioning that you can change the default of gnome-terminal to use a login shell (ie. bash -l) by editing the profile preferences.

go to Edit -> Profile Preferences -> Title and Command tab check the "Run command as a login shell" option