Is there a connection between the fluctuation-dissipation theorem and the Green–Kubo relations?

The fluctuation-dissipation theorem is a general principle that comes in many concrete forms. It expresses in each case a way how the spectrum of equilibrium fluctuations can be probed by applying weak external fields.

The Kubo relations are just one specific instance of it.

For example, Linda E. Reichl derives in her book on statistical physics the F/D theorem in Section 15D from general principles of nonequilibrium thermodynamics, and gives several quantitative applications, before she gives in Section 15H the Kubo relation as the microscopic expression for it.

A Kubo formula is a relation between a transport coefficient (diffusion constants, shear viscosity, etc) and the zero momentum, zero frequency limit of a retarded correlation function. Kubo formulas are derived by matching hydrodynamics to linear response theory. Fluctuation-dissipation (FD) relations connect the correlation function (Wightman function) to the imaginary part of the retarded correlator. These relations are valid for all frequencies, not just $\omega\to 0$. FD relations follow from analyticity and the KMS condition. The FD relations imply that Kubo formulas can be stated in terms of the zero frequency limit of the correlation function.