How to profile python 3.5 code line by line in jupyter notebook 5

To get the execution time for each line and get a nice colour coded heatmap, I use this nice ipython magic.... https://github.com/csurfer/pyheatmagic

Installation:

pip install py-heat-magic

To profile every single line in notebook:

• duplicate your notebook.
• Merge all cells (highlight all and shift-m)
• Create a new cell at the top
• enter

%load_ext heat

At the top of your 2nd cell enter this at the 1st line:

%%heat  

You may have issues if you have more than 2000 lines of code.

Just a summary of @S.A.'s answer

!pip install line_profiler
%load_ext line_profiler

def func():
    print('hi')

%lprun -f func func()

Install line profiler

conda install line_profiler

More info on http://mortada.net/easily-profile-python-code-in-jupyter.html

You can use line_profiler in jupyter notebook.

1. Install it: pip install line_profiler
2. Within your jupyter notebook, call: %load_ext line_profiler
3. Define your function prof_function as in your example.
4. Finally, profile as follows: %lprun -f prof_function prof_function()

Which will provide the output:

Timer unit: 1e-06 s

Total time: 3e-06 s
File: <ipython-input-22-41854af628da>
Function: prof_function at line 1

Line #      Hits         Time  Per Hit   % Time  Line Contents
==============================================================
     1                                           def prof_function():
     2         1          1.0      1.0     33.3      x=10*20
     3         1          1.0      1.0     33.3      y=10+x
     4         1          1.0      1.0     33.3      return (y)